Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55446 1-(4-Hydroxyphenyl)-4,8-dimethyl-10-(2,6,6-trimethylcyclohexen-1-yl)deca-3,5,7,9-tetraen-2-one 390.2571 391.2651 —
P55448 Myrrhanol A 460.3838 461.3899 —
P55449 1-(3,4-Dichlorophenyl)urea 203.9825 204.9901 —
P55452 Flunixin 296.0745 297.0820 —
P55455 557.1670 558.1718 —
P55456 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1027 503.1103 —
P55458 Rosmadial 344.1611 345.1687 —
P55459 7-Methyl-6,8-bis(methylthio)pyrrolo(1,2-a)pyrazine 224.0408 225.0488 —
P55460 Propyl 1-(propylsulfinyl)propyl disulfide 240.0673 241.0731 —
P55461 Losmapimod 383.1986 384.2078 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G224700 hypothetical protein NA 22
Glyma.06G283400 hypothetical protein NA 22
Glyma.07G011500 hypothetical protein NA 22
Glyma.09G111200 hypothetical protein AT3G12110:ACT11:actin-11 22
Glyma.09G168700 hypothetical protein AT3G17690:CNGC19:cyclic nucleotide gated channel 19 22
Glyma.09G231500 hypothetical protein NA 22
Glyma.10G193100 hypothetical protein AT3G23020:AT3G23020:Tetratricopeptide repeat (TPR)-like superfamily protein 22
Glyma.10G193400 hypothetical protein AT4G13620:AT4G13620:Integrase-type DNA-binding superfamily protein 22
Glyma.10G194200 hypothetical protein NA 22
Glyma.12G009300 hypothetical protein AT5G13710:SMT1:sterol methyltransferase 1 22