Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55327 8,8''-Biskoenigine 616.2599 617.2636 —
P55329 607.7540 608.7639 —
P55341 Tetraphenylporphyrin 614.2471 615.2555 —
P55343 624.9928 625.9968 —
P55350 609.0479 610.0613 —
P55357 339.0868 340.0942 —
P55361 Aerobactin 564.2333 565.2435 —
P55362 L-gamma-Glutamyl-beta-phenyl-beta-L-alanine 294.1177 295.1250 —
P55363 331.5836 332.5907 —
P55366 Dexrazoxane 268.1177 269.1254 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G224700 hypothetical protein NA 22
Glyma.06G283400 hypothetical protein NA 22
Glyma.07G011500 hypothetical protein NA 22
Glyma.09G111200 hypothetical protein AT3G12110:ACT11:actin-11 22
Glyma.09G168700 hypothetical protein AT3G17690:CNGC19:cyclic nucleotide gated channel 19 22
Glyma.09G231500 hypothetical protein NA 22
Glyma.10G193100 hypothetical protein AT3G23020:AT3G23020:Tetratricopeptide repeat (TPR)-like superfamily protein 22
Glyma.10G193400 hypothetical protein AT4G13620:AT4G13620:Integrase-type DNA-binding superfamily protein 22
Glyma.10G194200 hypothetical protein NA 22
Glyma.12G009300 hypothetical protein AT5G13710:SMT1:sterol methyltransferase 1 22