Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P08885	(5R,6S)-5,6-Epoxy-7-megastigmen-9-one	208.1431	209.1505	132
P09401	1-dodecanoyl-glycero-3-phosphoserine	441.2078	442.2136	132
P11790		136.0860	137.0936	132
P11944	2-Methoxyacetaminophen glucuronide	357.1057	358.1110	132
P12409	Ericamycin	499.1248	500.1304	132
P14079	Methyl salicylate O-[rhamnosyl-(1->6)-glucoside]	460.1563	461.1634	132
P17202	2,3-Dihydro-1H-pyrrolizine-5-carboxaldehyde	135.0669	136.0743	132
P21264		161.0127	162.0209	132
P21412	Anadur	506.3413	507.3481	132
P23158	Methyl n-formylanthranilate	179.0589	180.0657	132

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.12G049300	hypothetical protein	NA	946
Glyma.06G261900	hypothetical protein	NA	937
Glyma.07G021700	hypothetical protein	NA	936
Glyma.16G147900	hypothetical protein	NA	926
Glyma.07G017600	hypothetical protein	NA	924
Glyma.16G115500	hypothetical protein	NA	922
Glyma.16G121000	IQD20	AT3G51380:IQD20:IQ-domain 20	920
Glyma.13G201600	hypothetical protein	NA	915
Glyma.16G146700	hypothetical protein	NA	913
Glyma.16G105100	hypothetical protein	NA	904