Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P34357	1-Acetyl-3-carboxy-tetrahydro-beta-carboline	258.0998	259.1059	134
P34381	3beta-sulfooxy-7beta-N-acetylglucosaminyl-5-cholen-24-oyl glycine	730.3366	731.3411	134
P37678	(-)-2,3-Dihydrocitromycetin	292.0572	293.0640	134
P42697	Formononetin 7-O-(6''-acetylglcoside)	472.1391	473.1469	134
P51957	Dovyalicin E	379.2204	380.2286	134
P55306	1-O-(2-methoxy-hexadecyl)-sn-glycerol	346.3034	347.3118	134
P03988		189.0592	190.0680	133
P07033	AICAR	338.0620	339.0683	133
P08028	Fipexide	388.1183	389.1270	133
P17685	Beta-Casomorphin-5	579.2640	580.2711	133

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.12G049300	hypothetical protein	NA	946
Glyma.06G261900	hypothetical protein	NA	937
Glyma.07G021700	hypothetical protein	NA	936
Glyma.16G147900	hypothetical protein	NA	926
Glyma.07G017600	hypothetical protein	NA	924
Glyma.16G115500	hypothetical protein	NA	922
Glyma.16G121000	IQD20	AT3G51380:IQD20:IQ-domain 20	920
Glyma.13G201600	hypothetical protein	NA	915
Glyma.16G146700	hypothetical protein	NA	913
Glyma.16G105100	hypothetical protein	NA	904