Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P37074 Ankalactone 338.1703 339.1787 145
P44378 Malyngamide P 457.2574 458.2627 145
P44487 PIP(20:0/18:1(12Z)-2OH(9,10)) 1004.5455 1005.5421 145
P45739 Pubescenine 495.2845 496.2922 145
P46931 670.2582 671.2691 145
P54280 Brachycerine 546.2208 547.2298 145
P00923 Parguerol 456.1477 457.1530 144
P03962 18-hydroxyjaconine 403.1426 404.1512 144
P06903 259.0544 260.0620 144
P09821 L-Leucine-p-nitroanilide 251.1247 252.1302 144

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G049300 hypothetical protein NA 946
Glyma.06G261900 hypothetical protein NA 937
Glyma.07G021700 hypothetical protein NA 936
Glyma.16G147900 hypothetical protein NA 926
Glyma.07G017600 hypothetical protein NA 924
Glyma.16G115500 hypothetical protein NA 922
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 920
Glyma.13G201600 hypothetical protein NA 915
Glyma.16G146700 hypothetical protein NA 913
Glyma.16G105100 hypothetical protein NA 904