Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54994 487.3446 488.3495 —
P55002 Ripromycin 524.2860 525.2964 —
P55003 Gaudichaudiic acid C 592.2313 593.2400 —
P55005 16S-methyl-sphing-4-enine 313.2955 314.3020 —
P55006 Leucyl-3-epi-deoxynegamycin 345.2398 346.2468 —
P55011 Dehydroabietal 284.2130 285.2200 —
P55012 9R-hydroxy-2E,4E-decadienoic acid 184.1098 185.1166 —
P55015 Chokol F 240.1764 241.1830 —
P55018 286.2237 287.2321 —
P55020 Rosmarinine-2-acetate 395.1928 396.1994 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G049300 hypothetical protein NA 946
Glyma.06G261900 hypothetical protein NA 937
Glyma.07G021700 hypothetical protein NA 936
Glyma.16G147900 hypothetical protein NA 926
Glyma.07G017600 hypothetical protein NA 924
Glyma.16G115500 hypothetical protein NA 922
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 920
Glyma.13G201600 hypothetical protein NA 915
Glyma.16G146700 hypothetical protein NA 913
Glyma.16G105100 hypothetical protein NA 904