Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54709 Lophophorine 235.1212 236.1274 —
P54710 Phelligridin H 622.0684 623.0733 —
P54712 6'-O-alpha-D-Xylopyranosylalangiside 637.2291 638.2378 —
P54713 Darapladib 666.2681 667.2752 —
P54715 136.9595 137.9670 —
P54716 Isorenieratene 528.3755 529.3822 —
P54717 113.9690 114.9770 —
P54718 232.6162 233.6249 —
P54720 Bidenoside C 310.1412 311.1496 —
P54721 (5Z,7E)-(1S,3R)-18-[m-(1-hydroxy-1-ethylpropyl)-benzyloxy]-23,24-dinor-9,10-seco-5,7,10(19)-cholatriene-1,3-diol 522.3738 523.3791 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G049300 hypothetical protein NA 946
Glyma.06G261900 hypothetical protein NA 937
Glyma.07G021700 hypothetical protein NA 936
Glyma.16G147900 hypothetical protein NA 926
Glyma.07G017600 hypothetical protein NA 924
Glyma.16G115500 hypothetical protein NA 922
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 920
Glyma.13G201600 hypothetical protein NA 915
Glyma.16G146700 hypothetical protein NA 913
Glyma.16G105100 hypothetical protein NA 904