Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54631 525.8686 526.8765 —
P54635 1-Dehydroxybaccatin VI 698.2927 699.2980 —
P54637 531.1374 532.1443 —
P54638 531.3851 532.3948 —
P54639 199.9654 200.9730 —
P54643 741.1957 742.1988 —
P54644 622.0622 623.0702 —
P54645 159.9627 160.9703 —
P54647 19-Hydroxyconopharyngine 430.2089 431.2166 —
P54648 5,7-octadienoic acid 140.0828 421.2556 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G049300 hypothetical protein NA 946
Glyma.06G261900 hypothetical protein NA 937
Glyma.07G021700 hypothetical protein NA 936
Glyma.16G147900 hypothetical protein NA 926
Glyma.07G017600 hypothetical protein NA 924
Glyma.16G115500 hypothetical protein NA 922
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 920
Glyma.13G201600 hypothetical protein NA 915
Glyma.16G146700 hypothetical protein NA 913
Glyma.16G105100 hypothetical protein NA 904