Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P32890	2-Hydroxy-3-[(2-carboxyethyl)thio]-3-[2-(8-phenyloctyl)phenyl]propanoic acid	458.2131	459.2212	166
P35009	15-Veratroylgermine	673.3400	674.3443	166
P36333	Paniculidine B	233.1418	234.1491	166
P36634	beta-Casomorphin-7	692.3563	693.3642	166
P43004		889.4915	890.4974	166
P45760	Buxmicrophylline H	598.3926	599.4015	166
P52097	3',5-Dihydroxy-3,4,4'-trimethoxybibenzyl-5-O-glucoside	466.1835	467.1909	166
P00872	Styelsamine B	319.1298	320.1358	165
P01816	9H-Purine-9-ol	136.0401	137.0478	165
P03713	Chlordiazepoxide	299.0822	300.0898	165

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.12G049300	hypothetical protein	NA	946
Glyma.06G261900	hypothetical protein	NA	937
Glyma.07G021700	hypothetical protein	NA	936
Glyma.16G147900	hypothetical protein	NA	926
Glyma.07G017600	hypothetical protein	NA	924
Glyma.16G115500	hypothetical protein	NA	922
Glyma.16G121000	IQD20	AT3G51380:IQD20:IQ-domain 20	920
Glyma.13G201600	hypothetical protein	NA	915
Glyma.16G146700	hypothetical protein	NA	913
Glyma.16G105100	hypothetical protein	NA	904