Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P30099	Mespirenone	426.1849	427.1913	100
P31703	threo-Carolignan K	554.2080	555.2122	100
P32635		251.0490	252.0574	100
P33217	N-[2-(4-Prenyloxyphenyl)ethyl]tiglamide	287.1864	288.1927	100
P33234	2,3-Dihydro-2,3-dihydroxy-9-(4-hydroxy-3-methoxyphenyl)-1H-phenalen-1-one	336.0996	337.1071	100
P35379		521.3017	522.3110	100
P35543	5beta-pregnane-17alpha,20beta,21-triol-3,11-dione	364.2208	365.2274	100
P35649	Antibiotic BU 3292TA	644.3473	645.3579	100
P36585	Crocinervolide	210.1236	631.3793	100
P39233	Sordarin-3-carboxylic acid	508.2648	509.2712	100

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.12G049300	hypothetical protein	NA	946
Glyma.06G261900	hypothetical protein	NA	937
Glyma.07G021700	hypothetical protein	NA	936
Glyma.16G147900	hypothetical protein	NA	926
Glyma.07G017600	hypothetical protein	NA	924
Glyma.16G115500	hypothetical protein	NA	922
Glyma.16G121000	IQD20	AT3G51380:IQD20:IQ-domain 20	920
Glyma.13G201600	hypothetical protein	NA	915
Glyma.16G146700	hypothetical protein	NA	913
Glyma.16G105100	hypothetical protein	NA	904