Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P24428	Talniflumate	414.0784	415.0855	205
P25466	Niazinin	343.1126	344.1185	205
P15762	Aristoloterpenate II	527.1950	528.2020	204
P03342	D-Alanyl-alanyl-poly(glycerolphosphate)	314.0858	315.0931	203
P05821	Pandangolide 3	362.1408	363.1478	203
P12578	4E,6E-undecenal	166.1341	167.1417	203
P14723	1-(9Z-octadecenoyl)-2-(5-oxo-7-carboxy-6E-heptenoyl)-sn-glycero-3-phosphoserine	691.3337	692.3416	203
P53229	Leurubicin	656.2476	657.2525	203
P13994	2-Methyl-1-hydroxypropyl-ThPP	496.0955	497.1062	202
P39176	Microtoenin C	941.5023	942.5093	202

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.12G049300	hypothetical protein	NA	946
Glyma.06G261900	hypothetical protein	NA	937
Glyma.07G021700	hypothetical protein	NA	936
Glyma.16G147900	hypothetical protein	NA	926
Glyma.07G017600	hypothetical protein	NA	924
Glyma.16G115500	hypothetical protein	NA	922
Glyma.16G121000	IQD20	AT3G51380:IQD20:IQ-domain 20	920
Glyma.13G201600	hypothetical protein	NA	915
Glyma.16G146700	hypothetical protein	NA	913
Glyma.16G105100	hypothetical protein	NA	904