Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P25550 Aristoloterpenate II 527.1984 528.2019 105
P27182 559.7915 560.8001 105
P28916 S-[(Z)-N-Hydroxy(phenyl)acetimidoyl]-L-glutathione 440.1367 441.1425 105
P29973 Galangin 5-methyl ether 284.0695 285.0757 105
P30623 665.7881 666.7973 105
P30987 6-[3-(2-carboxyethyl)-5-hydroxyphenoxy]-3,4,5-trihydroxyoxane-2-carboxylic acid 358.0894 359.0977 105
P31327 Aurantiomide A 372.1794 1117.5406 105
P31454 952.3496 953.3483 105
P31621 820.2727 821.2859 105
P32075 3-O-beta-D-Glucopyranosyl hederagenin 634.4028 635.4101 105

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G049300 hypothetical protein NA 946
Glyma.06G261900 hypothetical protein NA 937
Glyma.07G021700 hypothetical protein NA 936
Glyma.16G147900 hypothetical protein NA 926
Glyma.07G017600 hypothetical protein NA 924
Glyma.16G115500 hypothetical protein NA 922
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 920
Glyma.13G201600 hypothetical protein NA 915
Glyma.16G146700 hypothetical protein NA 913
Glyma.16G105100 hypothetical protein NA 904