Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P43814 Tetradeca-6,9,12-trienedioylcarnitine 395.2323 396.2414 107
P49916 Xenortide A 409.2673 410.2756 107
P49933 Senbusine A 423.2591 424.2675 107
P54867 605.9887 606.9963 107
P01520 5-(Methoxymethyl)-1H-pyrrole-2-carbaldehyde 139.0615 140.0689 106
P01943 Diethylthiophosphoric acid 170.0187 171.0271 106
P02335 Chloroxine 212.9710 213.9777 106
P03819 2,3-Dihydro-2,3-dihydroxy-9-phenyl-1H-phenalen-1-one 290.0966 291.1043 106
P04725 Firocoxib 336.1053 337.1106 106
P06531 4-Anilino-4-oxobutanoic acid 193.0736 194.0795 106

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G049300 hypothetical protein NA 946
Glyma.06G261900 hypothetical protein NA 937
Glyma.07G021700 hypothetical protein NA 936
Glyma.16G147900 hypothetical protein NA 926
Glyma.07G017600 hypothetical protein NA 924
Glyma.16G115500 hypothetical protein NA 922
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 920
Glyma.13G201600 hypothetical protein NA 915
Glyma.16G146700 hypothetical protein NA 913
Glyma.16G105100 hypothetical protein NA 904