Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P49283 1-[Fluoro(methoxy)phosphoryl]oxyicosa-5,8,11,14-tetraene 386.2397 387.2485 116
P52469 1-nonadecene-2,3R-dicarboxylic acid 354.2722 355.2780 116
P54014 N-Docosahexaenoyl Serine 415.2716 416.2775 116
P03881 1-Phenyl-1-cyclohexene 158.1087 159.1169 115
P03884 (2R,3R,4S,5R)-2-(Hydroxymethyl)-6-[(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxane-3,4,5-triol 326.1201 327.1263 115
P10074 Tamoxifen-N-glucuronide 547.2601 548.2664 115
P10859 Chlorhexidine 504.2037 505.2120 115
P11915 7-Oxostaurosporine 480.1801 481.1828 115
P15144 1-(4-Hydroxy-3,5-dimethoxyphenyl)-7-(4-hydroxy-3-methoxyphenyl)-3,5-heptanediol 406.1990 407.2051 115
P15201 Ternatoside D 611.2191 612.2258 115

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G049300 hypothetical protein NA 946
Glyma.06G261900 hypothetical protein NA 937
Glyma.07G021700 hypothetical protein NA 936
Glyma.16G147900 hypothetical protein NA 926
Glyma.07G017600 hypothetical protein NA 924
Glyma.16G115500 hypothetical protein NA 922
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 920
Glyma.13G201600 hypothetical protein NA 915
Glyma.16G146700 hypothetical protein NA 913
Glyma.16G105100 hypothetical protein NA 904