Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P11869	Sterequinone D	304.1081	305.1127	117
P12646	Asparenomycin A	340.0761	341.0851	117
P15474	Methyl syramuraldehydate	242.0775	243.0847	117
P17333	1-(1-methylethenyl)-3-(1-methylethyl)-benzene	160.1239	161.1307	117
P17337	Glucoerysodine	461.2040	462.2094	117
P19729	4-Ethyl-2,5-dimethyloxazole	125.0846	126.0911	117
P19799	Galangin 5-methyl ether	284.0690	285.0768	117
P23548	(4E)-Undec-4-enoyl-CoA	933.2692	934.2742	117
P25862	Amocarzine	371.1445	372.1498	117
P28613	Isorhamnetin 3-gentiotrioside-7-glucoside	964.2758	965.2795	117

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.12G049300	hypothetical protein	NA	946
Glyma.06G261900	hypothetical protein	NA	937
Glyma.07G021700	hypothetical protein	NA	936
Glyma.16G147900	hypothetical protein	NA	926
Glyma.07G017600	hypothetical protein	NA	924
Glyma.16G115500	hypothetical protein	NA	922
Glyma.16G121000	IQD20	AT3G51380:IQD20:IQ-domain 20	920
Glyma.13G201600	hypothetical protein	NA	915
Glyma.16G146700	hypothetical protein	NA	913
Glyma.16G105100	hypothetical protein	NA	904