Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55548 347.3085 348.3149 —
P55550 16-Methylheptadecanoylcarnitine 427.3718 428.3783 —
P55555 Pro-Pro-Phe 359.1790 360.1862 —
P55556 273.9162 274.9238 —
P55557 177.9525 178.9596 —
P55558 127.9526 128.9604 —
P55560 Evodone 164.0824 329.1720 —
P55562 Isomytiloxanthin 598.4011 599.4090 —
P55563 108.0105 109.0176 —
P55565 (-)-Tetrodecamycin 334.1416 335.1503 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.01G039600 hypothetical protein NA 22
Glyma.01G231700 hypothetical protein AT4G10180:DET1:light-mediated development protein 1 / deetiolated1 (DET1) 22
Glyma.02G097300 hypothetical protein AT1G10840:TIF3H1:translation initiation factor 3 subunit H1 22
Glyma.02G097400 hypothetical protein AT3G28040:AT3G28040:Leucine-rich receptor-like protein kinase family protein 22
Glyma.03G177600 hypothetical protein AT2G37050:AT2G37050:Leucine-rich repeat protein kinase family protein 22
Glyma.03G244500 hypothetical protein AT3G05090:LRS1:Transducin/WD40 repeat-like superfamily protein 22
Glyma.04G083000 hypothetical protein AT4G32780:AT4G32780:phosphoinositide binding protein 22
Glyma.04G111300 hypothetical protein AT1G71380:CEL3:cellulase 3 22
Glyma.04G237700 hypothetical protein NA 22
Glyma.06G204900 hypothetical protein AT1G74120:AT1G74120:Mitochondrial transcription termination factor family protein 22