Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55180 Haloxyline B 435.3680 436.3770 —
P55183 Ethyl (2S,3S)-3-[[(2S)-1-[[(2S)-1-hydroxypent-4-yn-2-yl]amino]-4-methyl-1-oxopentan-2-yl]carbamoyl]oxirane-2-carboxylate 354.1772 355.1835 —
P55184 Speciosin D 194.0581 195.0659 —
P55188 Prop-2-enylcyclohexane 124.1246 125.1317 —
P55189 15-Acetoxyverruculogen 569.2418 570.2499 —
P55191 609.0476 610.0568 —
P55194 Sarglaperoxide A 384.1932 385.2011 —
P55195 3-Hydroxy-p-mentha-1,8-dien-7-al 166.0982 167.1053 —
P55197 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2686 417.2763 —
P55198 775.2278 776.2313 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G210500 hypothetical protein NA 23
Glyma.16G213000 hypothetical protein AT1G48380:RHL1:root hair initiation protein root hairless 1 (RHL1) 23
Glyma.17G039200 hypothetical protein NA 23
Glyma.17G095900 hypothetical protein NA 23
Glyma.17G213600 hypothetical protein AT4G32060:AT4G32060:calcium-binding EF hand family protein 23
Glyma.18G009100 hypothetical protein AT1G67620:AT1G67620:Lojap-related protein 23
Glyma.18G009200 hypothetical protein NA 23
Glyma.18G056300 hypothetical protein AT1G16870:AT1G16870:mitochondrial 28S ribosomal protein S29-like protein 23
Glyma.18G220800 hypothetical protein NA 23
Glyma.01G019000 hypothetical protein AT5G46800:BOU:Mitochondrial substrate carrier family protein 22