Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P26418 Antibiotic 273a1alpha 1112.3282 1113.3409 231
P30811 767.2566 768.2643 231
P04078 311.5769 312.5829 230
P14825 9R-hydroxy-2E,4E-decadienoic acid 184.1086 185.1164 230
P17592 175.1437 176.1505 230
P31714 4,4'-Dihydroxystilbene 212.0832 213.0898 230
P20017 343.2428 344.2506 229
P21903 Triptregeline H 611.2282 612.2377 229
P31991 Irroratin A 378.2030 379.2088 229
P26216 trans-2-Enoyl-OPC6-CoA 1013.2870 1014.2977 228

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G035600 hypothetical protein AT5G45600:GAS41:YEATS family protein 23
Glyma.12G102400 hypothetical protein AT4G15180:SDG2:SET domain protein 2 23
Glyma.13G200400 hypothetical protein NA 23
Glyma.14G033600 hypothetical protein AT2G13370:CHR5:chromatin remodeling 5 23
Glyma.15G213200 hypothetical protein AT1G53720:CYP59:cyclophilin 59 23
Glyma.15G232700 hypothetical protein NA 23
Glyma.15G261600 hypothetical protein AT1G16280:RH36:RNA helicase 36 23
Glyma.16G096900 hypothetical protein AT1G68690:PERK9:Protein kinase superfamily protein 23
Glyma.16G140700 hypothetical protein NA 23
Glyma.16G181300 hypothetical protein NA 23