Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55217 Cryptophycin 52 668.2910 669.3012 —
P55219 Anadur 506.3390 507.3476 —
P55221 609.0220 610.0260 —
P55224 Hicksoane C 608.0116 609.0195 —
P55225 Haloxyline B 435.3725 436.3803 —
P55226 690.1733 691.1811 —
P55227 Pectenol A 582.4057 583.4119 —
P55228 609.6882 610.6931 —
P55232 609.7950 610.7988 —
P55233 667.3010 668.3098 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G035600 hypothetical protein AT5G45600:GAS41:YEATS family protein 23
Glyma.12G102400 hypothetical protein AT4G15180:SDG2:SET domain protein 2 23
Glyma.13G200400 hypothetical protein NA 23
Glyma.14G033600 hypothetical protein AT2G13370:CHR5:chromatin remodeling 5 23
Glyma.15G213200 hypothetical protein AT1G53720:CYP59:cyclophilin 59 23
Glyma.15G232700 hypothetical protein NA 23
Glyma.15G261600 hypothetical protein AT1G16280:RH36:RNA helicase 36 23
Glyma.16G096900 hypothetical protein AT1G68690:PERK9:Protein kinase superfamily protein 23
Glyma.16G140700 hypothetical protein NA 23
Glyma.16G181300 hypothetical protein NA 23