Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08589 Benzomalvin D 381.1494 382.1579 250
P23519 Lapathoside A 986.2755 987.2789 250
P44926 Eunicellin 522.2769 523.2852 250
P29538 DG(2:0/0:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 466.2567 467.2613 249
P35069 1-hexadecanoyl-2-succinyl-sn-glycero-phosphocholine 595.3591 596.3657 249
P11244 Maculalactone K 532.1815 533.1890 248
P18979 Justalakonin 528.1312 529.1358 247
P49160 924.4051 925.4092 247
P30313 Sufotidine 421.2175 422.2210 246
P42443 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3412 455.3485 246

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G035600 hypothetical protein AT5G45600:GAS41:YEATS family protein 23
Glyma.12G102400 hypothetical protein AT4G15180:SDG2:SET domain protein 2 23
Glyma.13G200400 hypothetical protein NA 23
Glyma.14G033600 hypothetical protein AT2G13370:CHR5:chromatin remodeling 5 23
Glyma.15G213200 hypothetical protein AT1G53720:CYP59:cyclophilin 59 23
Glyma.15G232700 hypothetical protein NA 23
Glyma.15G261600 hypothetical protein AT1G16280:RH36:RNA helicase 36 23
Glyma.16G096900 hypothetical protein AT1G68690:PERK9:Protein kinase superfamily protein 23
Glyma.16G140700 hypothetical protein NA 23
Glyma.16G181300 hypothetical protein NA 23