Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P12304 Amrubicin 483.1476 484.1512 176
P17789 Kaempferol 3-neohesperidoside-7-(6''-malonylglucoside) 872.2263 873.2325 176
P20561 669.1601 670.1662 176
P29540 Kadsuphilol L 606.2044 607.2073 176
P29563 Sulfocostunolide A 312.1036 313.1116 176
P29935 Acantrifoside A 942.5143 943.5248 176
P36283 Isopropyl dodecylfluorophosphonate 294.2113 295.2185 176
P38088 365.6483 366.6561 176
P00499 1-Pentanesulfonic acid 152.0504 153.0569 175
P32791 Tenuecyclamide A 460.0996 461.1056 175

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G035600 hypothetical protein AT5G45600:GAS41:YEATS family protein 23
Glyma.12G102400 hypothetical protein AT4G15180:SDG2:SET domain protein 2 23
Glyma.13G200400 hypothetical protein NA 23
Glyma.14G033600 hypothetical protein AT2G13370:CHR5:chromatin remodeling 5 23
Glyma.15G213200 hypothetical protein AT1G53720:CYP59:cyclophilin 59 23
Glyma.15G232700 hypothetical protein NA 23
Glyma.15G261600 hypothetical protein AT1G16280:RH36:RNA helicase 36 23
Glyma.16G096900 hypothetical protein AT1G68690:PERK9:Protein kinase superfamily protein 23
Glyma.16G140700 hypothetical protein NA 23
Glyma.16G181300 hypothetical protein NA 23