Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55418 216.8746 217.8826 —
P55419 (+)-Neoacrimarine-H 567.1910 568.1955 —
P55425 N-[(2S)-3-[4-[2-(5-Methyl-2-phenyl-1,3-oxazol-4-yl)ethoxy]phenyl]-2-[[(Z)-4-oxo-4-[4-(trifluoromethyl)phenyl]but-2-en-2-yl]amino]propyl]propanamide 619.2572 620.2615 —
P55430 Tricornoside D 536.1464 537.1540 —
P55431 Luteolin 7-(2''-glucosyllactate) 520.1280 521.1380 —
P55433 24-ethyl-5alpha-cholest-25-en-3alpha,12alpha,16alpha-triol 446.3686 447.3753 —
P55434 Foetisulfide A 224.0393 225.0460 —
P55435 Butyl-meta-cycloheptylprodiginine 391.2601 392.2651 —
P55439 (4S*,6S*)-Dihydroxy-6-(14'Z-nonadecenyl)-2-cyclohexenone 392.3353 393.3424 —
P55441 538.1411 539.1490 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G046600 hypothetical protein AT2G17820:HK1:histidine kinase 1 23
Glyma.04G183500 hypothetical protein NA 23
Glyma.04G236900 hypothetical protein AT5G53460:GLT1:NADH-dependent glutamate synthase 1 23
Glyma.07G070900 hypothetical protein AT1G31870:AT1G31870:pre-mRNA-splicing factor of RES complex protein 23
Glyma.08G140400 hypothetical protein NA 23
Glyma.08G184000 hypothetical protein AT2G01080:AT2G01080:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 23
Glyma.09G042600 hypothetical protein AT5G49150:GEX2:gamete expressed 2 23
Glyma.11G147500 hypothetical protein AT5G60550:GRIK2:geminivirus rep interacting kinase 2__AT3G45240:GRIK1:geminivirus rep interacting kinase 1 23
Glyma.12G008000 hypothetical protein AT3G52090:NRPB11:DNA-directed RNA polymerase, RBP11-like protein 23
Glyma.12G023300 hypothetical protein NA 23