Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55235 607.8970 608.9062 —
P55236 Norhygrine 127.0985 128.1063 —
P55237 Briaexcavatolide K 584.2479 585.2553 —
P55238 607.9278 608.9337 —
P55239 609.5829 610.5918 —
P55243 607.9804 608.9906 —
P55244 Beilschmieflavonoid A 614.2514 615.2599 —
P55246 Dicerandrol A 666.1878 667.1909 —
P55247 609.5259 610.5340 —
P55248 Ilmofosine 525.3701 526.3741 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G046600 hypothetical protein AT2G17820:HK1:histidine kinase 1 23
Glyma.04G183500 hypothetical protein NA 23
Glyma.04G236900 hypothetical protein AT5G53460:GLT1:NADH-dependent glutamate synthase 1 23
Glyma.07G070900 hypothetical protein AT1G31870:AT1G31870:pre-mRNA-splicing factor of RES complex protein 23
Glyma.08G140400 hypothetical protein NA 23
Glyma.08G184000 hypothetical protein AT2G01080:AT2G01080:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 23
Glyma.09G042600 hypothetical protein AT5G49150:GEX2:gamete expressed 2 23
Glyma.11G147500 hypothetical protein AT5G60550:GRIK2:geminivirus rep interacting kinase 2__AT3G45240:GRIK1:geminivirus rep interacting kinase 1 23
Glyma.12G008000 hypothetical protein AT3G52090:NRPB11:DNA-directed RNA polymerase, RBP11-like protein 23
Glyma.12G023300 hypothetical protein NA 23