Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55199 Neoechinulin 391.1908 392.1990 —
P55200 Oxybuprocaine 308.2048 617.4153 —
P55202 Triptregeline B 653.2490 654.2596 —
P55204 Monascorubramine 381.1973 382.2060 —
P55205 PA(20:4(5Z,8Z,11Z,14Z)/14:1(9Z)) 666.4297 667.4397 —
P55208 Menaquinol 310.1940 311.2013 —
P55211 391.3353 392.3429 —
P55212 (5Z,9Z)-2-methoxy-5,9-hexacosadienoic acid 422.3731 423.3810 —
P55213 Indocarbazostatin D 512.1345 513.1415 —
P55216 160.9605 161.9681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G046600 hypothetical protein AT2G17820:HK1:histidine kinase 1 23
Glyma.04G183500 hypothetical protein NA 23
Glyma.04G236900 hypothetical protein AT5G53460:GLT1:NADH-dependent glutamate synthase 1 23
Glyma.07G070900 hypothetical protein AT1G31870:AT1G31870:pre-mRNA-splicing factor of RES complex protein 23
Glyma.08G140400 hypothetical protein NA 23
Glyma.08G184000 hypothetical protein AT2G01080:AT2G01080:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 23
Glyma.09G042600 hypothetical protein AT5G49150:GEX2:gamete expressed 2 23
Glyma.11G147500 hypothetical protein AT5G60550:GRIK2:geminivirus rep interacting kinase 2__AT3G45240:GRIK1:geminivirus rep interacting kinase 1 23
Glyma.12G008000 hypothetical protein AT3G52090:NRPB11:DNA-directed RNA polymerase, RBP11-like protein 23
Glyma.12G023300 hypothetical protein NA 23