Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55161 1-dimethylarsinoyl-decane 262.1259 263.1321 —
P55163 2-Propylphenol 136.0890 409.2738 —
P55165 601.4141 602.4200 —
P55167 17-(4-Hydroxyphenyl)heptadecanoyl adenylate 691.3377 692.3438 —
P55169 265.2467 266.2533 —
P55170 12R-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-tridecanoic acid 503.2855 504.2909 —
P55171 Phyllanthusmin C 512.1315 513.1352 —
P55175 Aspergilone A 386.1888 387.1962 —
P55176 2-Benzyl-aminoethanol 151.0991 454.3046 —
P55179 Chatferin 336.2268 337.2331 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G046600 hypothetical protein AT2G17820:HK1:histidine kinase 1 23
Glyma.04G183500 hypothetical protein NA 23
Glyma.04G236900 hypothetical protein AT5G53460:GLT1:NADH-dependent glutamate synthase 1 23
Glyma.07G070900 hypothetical protein AT1G31870:AT1G31870:pre-mRNA-splicing factor of RES complex protein 23
Glyma.08G140400 hypothetical protein NA 23
Glyma.08G184000 hypothetical protein AT2G01080:AT2G01080:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 23
Glyma.09G042600 hypothetical protein AT5G49150:GEX2:gamete expressed 2 23
Glyma.11G147500 hypothetical protein AT5G60550:GRIK2:geminivirus rep interacting kinase 2__AT3G45240:GRIK1:geminivirus rep interacting kinase 1 23
Glyma.12G008000 hypothetical protein AT3G52090:NRPB11:DNA-directed RNA polymerase, RBP11-like protein 23
Glyma.12G023300 hypothetical protein NA 23