Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P10655 | 888.1522 | 889.1623 | 169 | |
| P11117 | 431.7028 | 432.7092 | 169 | |
| P12129 | 408.9855 | 409.9918 | 169 | |
| P22795 | Rhodiolinin | 480.1040 | 481.1141 | 169 |
| P24976 | (20R,22R)-20-O,22-O-(5'-hydroxy-methyl)-furfurylidene-2beta,3beta,25-trihydroxy-14beta-methyl-18-nor-5beta-cholesta-7,12-dien-6-one | 570.3155 | 571.3229 | 169 |
| P25855 | Israpafant | 488.1811 | 489.1888 | 169 |
| P32815 | 826.3427 | 827.3454 | 169 | |
| P46002 | Albothricin | 500.2704 | 501.2788 | 169 |
| P53391 | NA 30851A | 670.2612 | 671.2685 | 169 |
| P06861 | Idrapril | 258.1185 | 259.1256 | 168 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.02G046600 | hypothetical protein | AT2G17820:HK1:histidine kinase 1 | 23 | |
| Glyma.04G183500 | hypothetical protein | NA | 23 | |
| Glyma.04G236900 | hypothetical protein | AT5G53460:GLT1:NADH-dependent glutamate synthase 1 | 23 | |
| Glyma.07G070900 | hypothetical protein | AT1G31870:AT1G31870:pre-mRNA-splicing factor of RES complex protein | 23 | |
| Glyma.08G140400 | hypothetical protein | NA | 23 | |
| Glyma.08G184000 | hypothetical protein | AT2G01080:AT2G01080:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family | 23 | |
| Glyma.09G042600 | hypothetical protein | AT5G49150:GEX2:gamete expressed 2 | 23 | |
| Glyma.11G147500 | hypothetical protein | AT5G60550:GRIK2:geminivirus rep interacting kinase 2__AT3G45240:GRIK1:geminivirus rep interacting kinase 1 | 23 | |
| Glyma.12G008000 | hypothetical protein | AT3G52090:NRPB11:DNA-directed RNA polymerase, RBP11-like protein | 23 | |
| Glyma.12G023300 | hypothetical protein | NA | 23 |