Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P37887 | Starch acetate | 306.0940 | 307.1009 | 207 |
| P41794 | Xylogranatin A | 642.2652 | 643.2735 | 207 |
| P50979 | 261.2154 | 262.2224 | 207 | |
| P55337 | Fagopyrine | 670.2326 | 671.2406 | 207 |
| P18076 | (S)-4-(2,4-Difluoro-5-(pyrimidin-5-yl)phenyl)-4-methyl-5,6-dihydro-4H-1,3-thiazin-2-amine | 320.0919 | 321.0978 | 206 |
| P24832 | Stercobilin | 594.3421 | 595.3505 | 206 |
| P37255 | (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid | 454.3399 | 455.3477 | 206 |
| P08444 | (1R,6S)-6-Amino-5-oxocyclohex-2-ene-1-carboxylate | 155.0591 | 156.0664 | 205 |
| P13362 | Quercetin 3-coumaroyl-triglucoside | 488.1517 | 489.1566 | 205 |
| P15731 | HDMBOA-Glc | 387.1176 | 388.1224 | 205 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.02G046600 | hypothetical protein | AT2G17820:HK1:histidine kinase 1 | 23 | |
| Glyma.04G183500 | hypothetical protein | NA | 23 | |
| Glyma.04G236900 | hypothetical protein | AT5G53460:GLT1:NADH-dependent glutamate synthase 1 | 23 | |
| Glyma.07G070900 | hypothetical protein | AT1G31870:AT1G31870:pre-mRNA-splicing factor of RES complex protein | 23 | |
| Glyma.08G140400 | hypothetical protein | NA | 23 | |
| Glyma.08G184000 | hypothetical protein | AT2G01080:AT2G01080:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family | 23 | |
| Glyma.09G042600 | hypothetical protein | AT5G49150:GEX2:gamete expressed 2 | 23 | |
| Glyma.11G147500 | hypothetical protein | AT5G60550:GRIK2:geminivirus rep interacting kinase 2__AT3G45240:GRIK1:geminivirus rep interacting kinase 1 | 23 | |
| Glyma.12G008000 | hypothetical protein | AT3G52090:NRPB11:DNA-directed RNA polymerase, RBP11-like protein | 23 | |
| Glyma.12G023300 | hypothetical protein | NA | 23 |