Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P38174 Azaspiracid 13 859.4835 860.4922 240
P40405 659.3981 660.4063 239
P00636 157.9538 158.9609 238
P12469 2,5-Dimethylfuran 96.0568 97.0643 238
P22595 Mucronulatol-(4->5')-vestitol 572.1981 573.2085 238
P38652 Mollicellin M 416.0708 417.0813 238
P14214 Decarbamoylgonyautoxin 1 368.0761 369.0806 237
P22578 583.1306 584.1392 237
P30643 Tetralin 132.0926 133.1001 237
P13409 706.1236 707.1314 236

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G041000 hypothetical protein AT5G18140:AT5G18140:Chaperone DnaJ-domain superfamily protein 24
Glyma.16G041200 gdh1 AT3G03910:GDH3:glutamate dehydrogenase 3__AT5G18170:GDH1:glutamate dehydrogenase 1 24
Glyma.16G207600 hypothetical protein AT5G23550:AT5G23550:Got1/Sft2-like vescicle transport protein family 24
Glyma.17G007000 hypothetical protein NA 24
Glyma.19G223300 hypothetical protein AT4G01610:AT4G01610:Cysteine proteinases superfamily protein__AT1G02305:AT1G02305:Cysteine proteinases superfamily protein 24
Glyma.19G224000 hypothetical protein AT4G11160:AT4G11160:Translation initiation factor 2, small GTP-binding protein 24
Glyma.19G224100 hypothetical protein NA 24
Glyma.20G009700 hypothetical protein AT2G15820:OTP51:endonuclease 24
Glyma.20G018000 hypothetical protein AT1G70820:AT1G70820:phosphoglucomutase, putative / glucose phosphomutase 24
Glyma.01G009700 hypothetical protein NA 23