Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55418 216.8746 217.8826 —
P55419 (+)-Neoacrimarine-H 567.1910 568.1955 —
P55425 N-[(2S)-3-[4-[2-(5-Methyl-2-phenyl-1,3-oxazol-4-yl)ethoxy]phenyl]-2-[[(Z)-4-oxo-4-[4-(trifluoromethyl)phenyl]but-2-en-2-yl]amino]propyl]propanamide 619.2572 620.2615 —
P55430 Tricornoside D 536.1464 537.1540 —
P55431 Luteolin 7-(2''-glucosyllactate) 520.1280 521.1380 —
P55433 24-ethyl-5alpha-cholest-25-en-3alpha,12alpha,16alpha-triol 446.3686 447.3753 —
P55434 Foetisulfide A 224.0393 225.0460 —
P55435 Butyl-meta-cycloheptylprodiginine 391.2601 392.2651 —
P55439 (4S*,6S*)-Dihydroxy-6-(14'Z-nonadecenyl)-2-cyclohexenone 392.3353 393.3424 —
P55441 538.1411 539.1490 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G041000 hypothetical protein AT5G18140:AT5G18140:Chaperone DnaJ-domain superfamily protein 24
Glyma.16G041200 gdh1 AT3G03910:GDH3:glutamate dehydrogenase 3__AT5G18170:GDH1:glutamate dehydrogenase 1 24
Glyma.16G207600 hypothetical protein AT5G23550:AT5G23550:Got1/Sft2-like vescicle transport protein family 24
Glyma.17G007000 hypothetical protein NA 24
Glyma.19G223300 hypothetical protein AT4G01610:AT4G01610:Cysteine proteinases superfamily protein__AT1G02305:AT1G02305:Cysteine proteinases superfamily protein 24
Glyma.19G224000 hypothetical protein AT4G11160:AT4G11160:Translation initiation factor 2, small GTP-binding protein 24
Glyma.19G224100 hypothetical protein NA 24
Glyma.20G009700 hypothetical protein AT2G15820:OTP51:endonuclease 24
Glyma.20G018000 hypothetical protein AT1G70820:AT1G70820:phosphoglucomutase, putative / glucose phosphomutase 24
Glyma.01G009700 hypothetical protein NA 23