Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P37887 | Starch acetate | 306.0940 | 307.1009 | 207 |
| P41794 | Xylogranatin A | 642.2652 | 643.2735 | 207 |
| P50979 | 261.2154 | 262.2224 | 207 | |
| P55337 | Fagopyrine | 670.2326 | 671.2406 | 207 |
| P18076 | (S)-4-(2,4-Difluoro-5-(pyrimidin-5-yl)phenyl)-4-methyl-5,6-dihydro-4H-1,3-thiazin-2-amine | 320.0919 | 321.0978 | 206 |
| P24832 | Stercobilin | 594.3421 | 595.3505 | 206 |
| P37255 | (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid | 454.3399 | 455.3477 | 206 |
| P08444 | (1R,6S)-6-Amino-5-oxocyclohex-2-ene-1-carboxylate | 155.0591 | 156.0664 | 205 |
| P13362 | Quercetin 3-coumaroyl-triglucoside | 488.1517 | 489.1566 | 205 |
| P15731 | HDMBOA-Glc | 387.1176 | 388.1224 | 205 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.16G041000 | hypothetical protein | AT5G18140:AT5G18140:Chaperone DnaJ-domain superfamily protein | 24 | |
| Glyma.16G041200 | gdh1 | AT3G03910:GDH3:glutamate dehydrogenase 3__AT5G18170:GDH1:glutamate dehydrogenase 1 | 24 | |
| Glyma.16G207600 | hypothetical protein | AT5G23550:AT5G23550:Got1/Sft2-like vescicle transport protein family | 24 | |
| Glyma.17G007000 | hypothetical protein | NA | 24 | |
| Glyma.19G223300 | hypothetical protein | AT4G01610:AT4G01610:Cysteine proteinases superfamily protein__AT1G02305:AT1G02305:Cysteine proteinases superfamily protein | 24 | |
| Glyma.19G224000 | hypothetical protein | AT4G11160:AT4G11160:Translation initiation factor 2, small GTP-binding protein | 24 | |
| Glyma.19G224100 | hypothetical protein | NA | 24 | |
| Glyma.20G009700 | hypothetical protein | AT2G15820:OTP51:endonuclease | 24 | |
| Glyma.20G018000 | hypothetical protein | AT1G70820:AT1G70820:phosphoglucomutase, putative / glucose phosphomutase | 24 | |
| Glyma.01G009700 | hypothetical protein | NA | 23 |