Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55273 Cistanoside D 652.2406 653.2558 —
P55274 Clobenzorex 259.1142 260.1207 —
P55275 609.7594 610.7622 —
P55277 Tiegusanin I 570.2441 571.2512 —
P55281 607.8298 608.8337 —
P55282 Difluprednate 508.2267 509.2321 —
P55283 Aerobactin 564.2307 565.2395 —
P55284 Boletocrocin B 499.2284 500.2320 —
P55285 Nicotaxine 555.2530 556.2628 —
P55289 608.8615 609.8654 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.09G099500 hypothetical protein AT1G16310:AT1G16310:Cation efflux family protein 24
Glyma.09G099600 hypothetical protein NA 24
Glyma.09G099800 hypothetical protein NA 24
Glyma.10G237600 hypothetical protein NA 24
Glyma.11G122500 hypothetical protein AT1G49430:LACS2:long-chain acyl-CoA synthetase 2 24
Glyma.12G015800 hypothetical protein NA 24
Glyma.13G044300 hypothetical protein NA 24
Glyma.13G318900 hypothetical protein AT2G27810:NAT12:nucleobase-ascorbate transporter 12 24
Glyma.15G107100 hypothetical protein NA 24
Glyma.16G040700 hypothetical protein AT3G03890:AT3G03890:FMN binding protein 24