Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P38174 Azaspiracid 13 859.4835 860.4922 240
P40405 659.3981 660.4063 239
P00636 157.9538 158.9609 238
P12469 2,5-Dimethylfuran 96.0568 97.0643 238
P22595 Mucronulatol-(4->5')-vestitol 572.1981 573.2085 238
P38652 Mollicellin M 416.0708 417.0813 238
P14214 Decarbamoylgonyautoxin 1 368.0761 369.0806 237
P22578 583.1306 584.1392 237
P30643 Tetralin 132.0926 133.1001 237
P13409 706.1236 707.1314 236

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G205100 hypothetical protein NA 25
Glyma.06G223300 hypothetical protein AT4G30860:SDG4:SET domain group 4 25
Glyma.06G289400 hypothetical protein AT2G20580:RPN1A:26S proteasome regulatory subunit S2 1A__AT4G28470:RPN1B:26S proteasome regulatory subunit S2 1B 25
Glyma.07G009600 hypothetical protein AT3G13860:HSP60-3A:heat shock protein 60-3A 25
Glyma.08G123400 hypothetical protein NA 25
Glyma.08G148700 hypothetical protein NA 25
Glyma.09G066300 hypothetical protein AT2G19400:AT2G19400:AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 25
Glyma.10G191800 hypothetical protein NA 25
Glyma.11G094800 hypothetical protein NA 25
Glyma.14G212500 hypothetical protein AT3G02850:SKOR:STELAR K+ outward rectifier 25