Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P33368 (3beta, 5beta)-pregn-16(17)-en-3-ol-20-one 3-O-alpha-l-arabinopyranosyl-(1-4)-beta-d-glucopyranosyl-(1-2)-beta-d-glucopyranoside 772.3798 773.3890 175
P37857 Dymacrin D 438.3482 439.3540 175
P40157 Cryptoporic acid C 832.4594 833.4660 175
P47127 (9Z,11E,13Z)-Octadeca-9,11,13-trienoylcarnitine 421.3172 422.3234 175
P47379 2-Amino-4-hydroxy-6,7-dimethyl-5,6,7,8-tetrahydropteridine 195.1146 196.1208 175
P49120 Leueantine B 623.3545 624.3611 175
P52537 Mycotoxin T 2 341.1479 342.1547 175
P00071 252.1318 253.1391 174
P04230 Finafloxacin 398.1387 399.1468 174
P05526 Monuron-TCA 198.0572 199.0630 174

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G205100 hypothetical protein NA 25
Glyma.06G223300 hypothetical protein AT4G30860:SDG4:SET domain group 4 25
Glyma.06G289400 hypothetical protein AT2G20580:RPN1A:26S proteasome regulatory subunit S2 1A__AT4G28470:RPN1B:26S proteasome regulatory subunit S2 1B 25
Glyma.07G009600 hypothetical protein AT3G13860:HSP60-3A:heat shock protein 60-3A 25
Glyma.08G123400 hypothetical protein NA 25
Glyma.08G148700 hypothetical protein NA 25
Glyma.09G066300 hypothetical protein AT2G19400:AT2G19400:AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 25
Glyma.10G191800 hypothetical protein NA 25
Glyma.11G094800 hypothetical protein NA 25
Glyma.14G212500 hypothetical protein AT3G02850:SKOR:STELAR K+ outward rectifier 25