Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P39464	Arginylvaline	273.1778	274.1868	157
P46016	Lignan	238.1723	239.1780	157
P49105	Methyl camaralate	542.3555	543.3634	157
P50718	N-(9Z,12Z-octadecadienoyl)-taurine	387.2449	388.2513	157
P55581	Chlovalicin	332.1407	333.1480	157
P01915	Cardiospermin	275.0986	276.1051	156
P06888	Ethotoin	204.0868	205.0943	156
P08139	Goniolactone B	472.1526	473.1587	156
P12066	Sildenafil	474.2105	475.2149	156
P15974	Dihydro-3-methyl-2(3H)-furanone	100.0512	101.0588	156

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.01G123900	hypothetical protein	AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein	996
Glyma.14G075900	hypothetical protein	NA	993
Glyma.16G031600	hypothetical protein	NA	992
Glyma.20G019700	hypothetical protein	NA	968
Glyma.16G057600	hypothetical protein	AT3G27170:CLC-B:chloride channel B	965
Glyma.06G291600	hypothetical protein	AT4G22930:PYR4:pyrimidin 4	951
Glyma.06G292000	hypothetical protein	NA	951
Glyma.06G292100	hypothetical protein	NA	951
Glyma.06G085200	hypothetical protein	NA	949
Glyma.09G053800	hypothetical protein	NA	949