Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55217 Cryptophycin 52 668.2910 669.3012 —
P55219 Anadur 506.3390 507.3476 —
P55221 609.0220 610.0260 —
P55224 Hicksoane C 608.0116 609.0195 —
P55225 Haloxyline B 435.3725 436.3803 —
P55226 690.1733 691.1811 —
P55227 Pectenol A 582.4057 583.4119 —
P55228 609.6882 610.6931 —
P55232 609.7950 610.7988 —
P55233 667.3010 668.3098 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 996
Glyma.14G075900 hypothetical protein NA 993
Glyma.16G031600 hypothetical protein NA 992
Glyma.20G019700 hypothetical protein NA 968
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 965
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 951
Glyma.06G292000 hypothetical protein NA 951
Glyma.06G292100 hypothetical protein NA 951
Glyma.06G085200 hypothetical protein NA 949
Glyma.09G053800 hypothetical protein NA 949