Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P30099 Mespirenone 426.1849 427.1913 100
P31703 threo-Carolignan K 554.2080 555.2122 100
P32635 251.0490 252.0574 100
P33217 N-[2-(4-Prenyloxyphenyl)ethyl]tiglamide 287.1864 288.1927 100
P33234 2,3-Dihydro-2,3-dihydroxy-9-(4-hydroxy-3-methoxyphenyl)-1H-phenalen-1-one 336.0996 337.1071 100
P35379 521.3017 522.3110 100
P35543 5beta-pregnane-17alpha,20beta,21-triol-3,11-dione 364.2208 365.2274 100
P35649 Antibiotic BU 3292TA 644.3473 645.3579 100
P36585 Crocinervolide 210.1236 631.3793 100
P39233 Sordarin-3-carboxylic acid 508.2648 509.2712 100

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 996
Glyma.14G075900 hypothetical protein NA 993
Glyma.16G031600 hypothetical protein NA 992
Glyma.20G019700 hypothetical protein NA 968
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 965
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 951
Glyma.06G292000 hypothetical protein NA 951
Glyma.06G292100 hypothetical protein NA 951
Glyma.06G085200 hypothetical protein NA 949
Glyma.09G053800 hypothetical protein NA 949