Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P13650 Dibalanocarpol 938.2662 939.2698 111
P14056 2-Oxo-8-methylthiooctanoic acid 204.0819 205.0892 111
P14846 2,3-Dihydro-1H-pyrrolizine-5-carboxaldehyde 135.0667 136.0746 111
P16984 N-D-Glucosylarylamine 255.1088 256.1158 111
P17883 587.8008 588.8095 111
P18890 Rhamnetin 3-rhamnosyl-(1->3)(4'''-acetylrhamnosyl)(1->6)-galactoside 812.2394 813.2447 111
P20995 Renieramycin R 605.2442 606.2541 111
P25679 Citronellate 170.1291 171.1358 111
P27806 Fenoverine 459.1623 460.1680 111
P28252 Hypochoeroside K 398.2271 399.2333 111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 996
Glyma.14G075900 hypothetical protein NA 993
Glyma.16G031600 hypothetical protein NA 992
Glyma.20G019700 hypothetical protein NA 968
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 965
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 951
Glyma.06G292000 hypothetical protein NA 951
Glyma.06G292100 hypothetical protein NA 951
Glyma.06G085200 hypothetical protein NA 949
Glyma.09G053800 hypothetical protein NA 949