Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P22190	1,2,3,4-Tetrahydroisoquinolin-1-yl formate	177.0771	178.0839	112
P22928	5'-Methoxybilobetin	582.1182	583.1188	112
P27128		776.3766	777.3825	112
P29586	Lotusanine B	620.3029	621.3105	112
P30035	Homalomenol E	256.2015	257.2082	112
P32326	3'-Hydroxy T-2 toxin	482.2115	483.2198	112
P33512	Kinetensin 4-7	571.2856	572.2882	112
P33795	Romucosine F	433.1285	434.1358	112
P35845	Fluvirucin B4	603.4164	604.4224	112
P38305	Kirrothricin	780.4552	781.4660	112

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.01G123900	hypothetical protein	AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein	996
Glyma.14G075900	hypothetical protein	NA	993
Glyma.16G031600	hypothetical protein	NA	992
Glyma.20G019700	hypothetical protein	NA	968
Glyma.16G057600	hypothetical protein	AT3G27170:CLC-B:chloride channel B	965
Glyma.06G291600	hypothetical protein	AT4G22930:PYR4:pyrimidin 4	951
Glyma.06G292000	hypothetical protein	NA	951
Glyma.06G292100	hypothetical protein	NA	951
Glyma.06G085200	hypothetical protein	NA	949
Glyma.09G053800	hypothetical protein	NA	949