Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G154800 hypothetical protein AT1G30840:PUP4:purine permease 4 26
Glyma.16G050000 hypothetical protein AT5G14040:PHT3;1:phosphate transporter 3;1 26
Glyma.17G145500 hypothetical protein AT4G17510:UCH3:ubiquitin C-terminal hydrolase 3 26
Glyma.18G045000 hypothetical protein AT5G45130:RHA1:Ras small GTP-binding family protein 26
Glyma.18G294900 hypothetical protein NA 26
Glyma.19G004700 Protein RST1 AT3G27670:RST1:ARM repeat superfamily protein 26
Glyma.19G033800 hypothetical protein AT3G02230:RGP1:reversibly glycosylated polypeptide 1 26
Glyma.19G126600 hypothetical protein NA 26
Glyma.20G114000 hypothetical protein NA 26
Glyma.01G047100 hypothetical protein AT1G14250:AT1G14250:GDA1/CD39 nucleoside phosphatase family protein__AT1G14230:AT1G14230:GDA1/CD39 nucleoside phosphatase family protein__AT2G02970:AT2G02970:GDA1/CD39 nucleoside phosphatase family protein 25