Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55235 607.8970 608.9062 —
P55236 Norhygrine 127.0985 128.1063 —
P55237 Briaexcavatolide K 584.2479 585.2553 —
P55238 607.9278 608.9337 —
P55239 609.5829 610.5918 —
P55243 607.9804 608.9906 —
P55244 Beilschmieflavonoid A 614.2514 615.2599 —
P55246 Dicerandrol A 666.1878 667.1909 —
P55247 609.5259 610.5340 —
P55248 Ilmofosine 525.3701 526.3741 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G154800 hypothetical protein AT1G30840:PUP4:purine permease 4 26
Glyma.16G050000 hypothetical protein AT5G14040:PHT3;1:phosphate transporter 3;1 26
Glyma.17G145500 hypothetical protein AT4G17510:UCH3:ubiquitin C-terminal hydrolase 3 26
Glyma.18G045000 hypothetical protein AT5G45130:RHA1:Ras small GTP-binding family protein 26
Glyma.18G294900 hypothetical protein NA 26
Glyma.19G004700 Protein RST1 AT3G27670:RST1:ARM repeat superfamily protein 26
Glyma.19G033800 hypothetical protein AT3G02230:RGP1:reversibly glycosylated polypeptide 1 26
Glyma.19G126600 hypothetical protein NA 26
Glyma.20G114000 hypothetical protein NA 26
Glyma.01G047100 hypothetical protein AT1G14250:AT1G14250:GDA1/CD39 nucleoside phosphatase family protein__AT1G14230:AT1G14230:GDA1/CD39 nucleoside phosphatase family protein__AT2G02970:AT2G02970:GDA1/CD39 nucleoside phosphatase family protein 25