Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55462 Schidigeragenin B 428.2908 429.2971 —
P55464 131.9595 132.9668 —
P55465 Medicagol 296.0316 297.0374 —
P55468 N-Desmethylzopiclone 374.0907 375.0977 —
P55469 Minwanensin 284.1634 285.1694 —
P55470 YM 47525 618.3033 619.3107 —
P55471 LysW-L-glutamyl 5-phosphate 356.0603 357.0673 —
P55474 Homoneoharringtonine 549.2443 550.2512 —
P55476 175.9825 176.9896 —
P55477 Ajugapantin A 550.2419 551.2490 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.01G153200 hypothetical protein AT1G31730:AT1G31730:Adaptin family protein 26
Glyma.03G019300 hypothetical protein NA 26
Glyma.08G116800 hypothetical protein AT1G29240:AT1G29240:transcription initiation factor TFIID subunit, putative (DUF688) 26
Glyma.08G145900 hypothetical protein AT4G39330:CAD9:cinnamyl alcohol dehydrogenase 9 26
Glyma.09G210800 hypothetical protein AT1G32050:SCAMP5:SCAMP family protein 26
Glyma.10G234300 hypothetical protein NA 26
Glyma.15G124200 hypothetical protein AT1G50500:HIT1:Membrane trafficking VPS53 family protein 26
Glyma.15G125900 hypothetical protein AT1G29820:AT1G29820:Magnesium transporter CorA-like family protein__AT1G29830:AT1G29830:Magnesium transporter CorA-like family protein 26
Glyma.15G138500 hypothetical protein NA 26
Glyma.15G154600 hypothetical protein AT2G34900:IMB1:Transcription factor GTE6 26