Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08589 Benzomalvin D 381.1494 382.1579 250
P23519 Lapathoside A 986.2755 987.2789 250
P44926 Eunicellin 522.2769 523.2852 250
P29538 DG(2:0/0:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 466.2567 467.2613 249
P35069 1-hexadecanoyl-2-succinyl-sn-glycero-phosphocholine 595.3591 596.3657 249
P11244 Maculalactone K 532.1815 533.1890 248
P18979 Justalakonin 528.1312 529.1358 247
P49160 924.4051 925.4092 247
P30313 Sufotidine 421.2175 422.2210 246
P42443 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3412 455.3485 246

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.01G153200 hypothetical protein AT1G31730:AT1G31730:Adaptin family protein 26
Glyma.03G019300 hypothetical protein NA 26
Glyma.08G116800 hypothetical protein AT1G29240:AT1G29240:transcription initiation factor TFIID subunit, putative (DUF688) 26
Glyma.08G145900 hypothetical protein AT4G39330:CAD9:cinnamyl alcohol dehydrogenase 9 26
Glyma.09G210800 hypothetical protein AT1G32050:SCAMP5:SCAMP family protein 26
Glyma.10G234300 hypothetical protein NA 26
Glyma.15G124200 hypothetical protein AT1G50500:HIT1:Membrane trafficking VPS53 family protein 26
Glyma.15G125900 hypothetical protein AT1G29820:AT1G29820:Magnesium transporter CorA-like family protein__AT1G29830:AT1G29830:Magnesium transporter CorA-like family protein 26
Glyma.15G138500 hypothetical protein NA 26
Glyma.15G154600 hypothetical protein AT2G34900:IMB1:Transcription factor GTE6 26