Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P49100 Glucoerysodine 461.2087 462.2138 191
P52536 3-Hydroxyisorenieratene 544.3713 545.3788 191
P08871 Cl-amidine 310.1188 311.1265 190
P18591 704.3079 705.3180 190
P25767 4'-Oxonebramine 304.1750 305.1815 190
P27511 593.2758 594.2841 190
P32289 N-[6-(2,3-Difluorophenyl)-2-oxo-1-(2,2,2-trifluoroethyl)azepan-3-yl]-4-(2-oxo-3H-imidazo[4,5-b]pyridin-1-yl)piperidine-1-carboxamide 566.2069 567.2152 190
P32698 229.1381 230.1452 190
P35852 515.7317 516.7406 190
P36564 Alloeremophilone 218.1657 437.3379 190

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.01G153200 hypothetical protein AT1G31730:AT1G31730:Adaptin family protein 26
Glyma.03G019300 hypothetical protein NA 26
Glyma.08G116800 hypothetical protein AT1G29240:AT1G29240:transcription initiation factor TFIID subunit, putative (DUF688) 26
Glyma.08G145900 hypothetical protein AT4G39330:CAD9:cinnamyl alcohol dehydrogenase 9 26
Glyma.09G210800 hypothetical protein AT1G32050:SCAMP5:SCAMP family protein 26
Glyma.10G234300 hypothetical protein NA 26
Glyma.15G124200 hypothetical protein AT1G50500:HIT1:Membrane trafficking VPS53 family protein 26
Glyma.15G125900 hypothetical protein AT1G29820:AT1G29820:Magnesium transporter CorA-like family protein__AT1G29830:AT1G29830:Magnesium transporter CorA-like family protein 26
Glyma.15G138500 hypothetical protein NA 26
Glyma.15G154600 hypothetical protein AT2G34900:IMB1:Transcription factor GTE6 26