Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P49100 Glucoerysodine 461.2087 462.2138 191
P52536 3-Hydroxyisorenieratene 544.3713 545.3788 191
P08871 Cl-amidine 310.1188 311.1265 190
P18591 704.3079 705.3180 190
P25767 4'-Oxonebramine 304.1750 305.1815 190
P27511 593.2758 594.2841 190
P32289 N-[6-(2,3-Difluorophenyl)-2-oxo-1-(2,2,2-trifluoroethyl)azepan-3-yl]-4-(2-oxo-3H-imidazo[4,5-b]pyridin-1-yl)piperidine-1-carboxamide 566.2069 567.2152 190
P32698 229.1381 230.1452 190
P35852 515.7317 516.7406 190
P36564 Alloeremophilone 218.1657 437.3379 190

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G062200 hypothetical protein AT5G15270:AT5G15270:RNA-binding KH domain-containing protein 27
Glyma.13G062500 hypothetical protein NA 27
Glyma.13G182200 hypothetical protein AT3G45100:SETH2:UDP-Glycosyltransferase superfamily protein 27
Glyma.16G014200 hypothetical protein AT5G12370:SEC10:exocyst complex component sec10 27
Glyma.16G117300 hypothetical protein NA 27
Glyma.17G215400 hypothetical protein NA 27
Glyma.18G050000 hypothetical protein NA 27
Glyma.18G219600 CRK59 cysteine-rich receptor-like protein kinase AT4G11470:CRK31:cysteine-rich RLK (RECEPTOR-like protein kinase) 31 27
Glyma.18G230600 hypothetical protein AT3G61250:MYB17:myb domain protein 17 27
Glyma.19G033700 hypothetical protein AT3G02320:AT3G02320:N2,N2-dimethylguanosine tRNA methyltransferase__AT5G15810:AT5G15810:tRNA (guanine(26)-N(2))-dimethyltransferase 27