Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11263 Psilostachyin C 264.1332 265.1404 224
P14345 Levetiracetam 170.1025 171.1105 224
P17555 Latrunculin C 397.1929 398.2009 224
P42432 Phthalsaurediethylhexylester 306.1820 613.3715 224
P40215 CDP-DG(i-18:0/18:2(9Z,11Z)) 1005.5413 1006.5526 223
P07094 5-(Methoxymethyl)-1H-pyrrole-2-carbaldehyde 139.0620 140.0688 222
P38156 Montanastatin 740.4093 741.4144 222
P41025 CDP-DG(i-15:0/20:4(5Z,8Z,11Z,13E)+=O(15)) 1001.4851 1002.4923 222
P06065 4-Toluenesulfonamide 171.0341 172.0404 221
P13789 (2S,3S)-3-Hydroxyasparagine 148.0485 149.0561 221

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G062200 hypothetical protein AT5G15270:AT5G15270:RNA-binding KH domain-containing protein 27
Glyma.13G062500 hypothetical protein NA 27
Glyma.13G182200 hypothetical protein AT3G45100:SETH2:UDP-Glycosyltransferase superfamily protein 27
Glyma.16G014200 hypothetical protein AT5G12370:SEC10:exocyst complex component sec10 27
Glyma.16G117300 hypothetical protein NA 27
Glyma.17G215400 hypothetical protein NA 27
Glyma.18G050000 hypothetical protein NA 27
Glyma.18G219600 CRK59 cysteine-rich receptor-like protein kinase AT4G11470:CRK31:cysteine-rich RLK (RECEPTOR-like protein kinase) 31 27
Glyma.18G230600 hypothetical protein AT3G61250:MYB17:myb domain protein 17 27
Glyma.19G033700 hypothetical protein AT3G02320:AT3G02320:N2,N2-dimethylguanosine tRNA methyltransferase__AT5G15810:AT5G15810:tRNA (guanine(26)-N(2))-dimethyltransferase 27