Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55273 Cistanoside D 652.2406 653.2558 —
P55274 Clobenzorex 259.1142 260.1207 —
P55275 609.7594 610.7622 —
P55277 Tiegusanin I 570.2441 571.2512 —
P55281 607.8298 608.8337 —
P55282 Difluprednate 508.2267 509.2321 —
P55283 Aerobactin 564.2307 565.2395 —
P55284 Boletocrocin B 499.2284 500.2320 —
P55285 Nicotaxine 555.2530 556.2628 —
P55289 608.8615 609.8654 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G216000 hypothetical protein AT3G27740:CARA:carbamoyl phosphate synthetase A 27
Glyma.05G222500 hypothetical protein AT2G19600:KEA4:K+ efflux antiporter 4 27
Glyma.06G203000 hypothetical protein NA 27
Glyma.06G296500 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 27
Glyma.07G059200 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 27
Glyma.07G107100 DHBK putative 3,4-dihydroxy-2-butanone kinase AT3G17770:AT3G17770:Dihydroxyacetone kinase 27
Glyma.07G129900 hypothetical protein AT2G06925:PLA2-ALPHA:Phospholipase A2 family protein 27
Glyma.08G099800 hypothetical protein NA 27
Glyma.08G145700 hypothetical protein AT5G64730:AT5G64730:Transducin/WD40 repeat-like superfamily protein 27
Glyma.08G150700 hypothetical protein AT2G44500:AT2G44500:O-fucosyltransferase family protein 27