Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P00823 (-)-Mintlactone 306.0213 307.0281 164
P07492 Polypropylene glycol (m w 1,200-3,000) 134.0949 135.1012 164
P10281 Undeca-2,4,6-trienedioyl-CoA 959.2076 960.2157 164
P15662 513.2875 514.2951 164
P18935 Marchantin P 438.1840 439.1899 164
P22654 Excavatolide D 524.2197 525.2274 164
P32650 Thonzylamine 286.1756 287.1822 164
P34351 Arginylglutamine 302.1710 605.3489 164
P48467 13-Apo-beta-carotenone 258.1964 259.2031 164
P01110 (R)-11,12,13-Trinor-1(5),6,9-guaiatrien-8-one 174.1043 175.1111 163

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G216000 hypothetical protein AT3G27740:CARA:carbamoyl phosphate synthetase A 27
Glyma.05G222500 hypothetical protein AT2G19600:KEA4:K+ efflux antiporter 4 27
Glyma.06G203000 hypothetical protein NA 27
Glyma.06G296500 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 27
Glyma.07G059200 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 27
Glyma.07G107100 DHBK putative 3,4-dihydroxy-2-butanone kinase AT3G17770:AT3G17770:Dihydroxyacetone kinase 27
Glyma.07G129900 hypothetical protein AT2G06925:PLA2-ALPHA:Phospholipase A2 family protein 27
Glyma.08G099800 hypothetical protein NA 27
Glyma.08G145700 hypothetical protein AT5G64730:AT5G64730:Transducin/WD40 repeat-like superfamily protein 27
Glyma.08G150700 hypothetical protein AT2G44500:AT2G44500:O-fucosyltransferase family protein 27