Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55548 347.3085 348.3149 —
P55550 16-Methylheptadecanoylcarnitine 427.3718 428.3783 —
P55555 Pro-Pro-Phe 359.1790 360.1862 —
P55556 273.9162 274.9238 —
P55557 177.9525 178.9596 —
P55558 127.9526 128.9604 —
P55560 Evodone 164.0824 329.1720 —
P55562 Isomytiloxanthin 598.4011 599.4090 —
P55563 108.0105 109.0176 —
P55565 (-)-Tetrodecamycin 334.1416 335.1503 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G011900 hypothetical protein AT5G55960:AT5G55960:transmembrane protein C9orf5 protein 28
Glyma.14G192100 hypothetical protein AT5G58870:ftsh9:FTSH protease 9 28
Glyma.14G206800 hypothetical protein NA 28
Glyma.15G012000 hypothetical protein NA 28
Glyma.15G019600 hypothetical protein AT5G48120:MET18:ARM repeat superfamily protein 28
Glyma.17G250700 hypothetical protein AT1G75210:AT1G75210:HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase 28
Glyma.19G246000 hypothetical protein AT3G04630:WDL1:WVD2-like 1 28
Glyma.20G009300 hypothetical protein NA 28
Glyma.02G277200 hypothetical protein AT5G12290:DGS1:dgd1 suppressor 1 27
Glyma.03G022400 hypothetical protein NA 27