Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55273 Cistanoside D 652.2406 653.2558 —
P55274 Clobenzorex 259.1142 260.1207 —
P55275 609.7594 610.7622 —
P55277 Tiegusanin I 570.2441 571.2512 —
P55281 607.8298 608.8337 —
P55282 Difluprednate 508.2267 509.2321 —
P55283 Aerobactin 564.2307 565.2395 —
P55284 Boletocrocin B 499.2284 500.2320 —
P55285 Nicotaxine 555.2530 556.2628 —
P55289 608.8615 609.8654 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G261500 hypothetical protein NA 28
Glyma.08G094400 hypothetical protein AT1G18390:AT1G18390:Serine/Threonine kinase family catalytic domain protein 28
Glyma.08G123100 hypothetical protein AT3G20050:TCP-1:T-complex protein 1 alpha subunit 28
Glyma.09G018600 hypothetical protein NA 28
Glyma.10G156300 hypothetical protein AT3G05210:ERCC1:nucleotide repair protein 28
Glyma.11G144800 hypothetical protein AT2G28250:NCRK:Protein kinase superfamily protein 28
Glyma.11G145000 hypothetical protein AT4G27490:RRP41L:3'-5'-exoribonuclease family protein 28
Glyma.12G213100 hypothetical protein AT3G20560:PDIL5-3:PDI-like 5-3__AT4G27080:PDIL5-4:PDI-like 5-4 28
Glyma.13G166300 hypothetical protein NA 28
Glyma.13G238400 hypothetical protein AT3G46930:AT3G46930:Protein kinase superfamily protein__AT5G58950:AT5G58950:Protein kinase superfamily protein 28