Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P49100 Glucoerysodine 461.2087 462.2138 191
P52536 3-Hydroxyisorenieratene 544.3713 545.3788 191
P08871 Cl-amidine 310.1188 311.1265 190
P18591 704.3079 705.3180 190
P25767 4'-Oxonebramine 304.1750 305.1815 190
P27511 593.2758 594.2841 190
P32289 N-[6-(2,3-Difluorophenyl)-2-oxo-1-(2,2,2-trifluoroethyl)azepan-3-yl]-4-(2-oxo-3H-imidazo[4,5-b]pyridin-1-yl)piperidine-1-carboxamide 566.2069 567.2152 190
P32698 229.1381 230.1452 190
P35852 515.7317 516.7406 190
P36564 Alloeremophilone 218.1657 437.3379 190

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G261500 hypothetical protein NA 28
Glyma.08G094400 hypothetical protein AT1G18390:AT1G18390:Serine/Threonine kinase family catalytic domain protein 28
Glyma.08G123100 hypothetical protein AT3G20050:TCP-1:T-complex protein 1 alpha subunit 28
Glyma.09G018600 hypothetical protein NA 28
Glyma.10G156300 hypothetical protein AT3G05210:ERCC1:nucleotide repair protein 28
Glyma.11G144800 hypothetical protein AT2G28250:NCRK:Protein kinase superfamily protein 28
Glyma.11G145000 hypothetical protein AT4G27490:RRP41L:3'-5'-exoribonuclease family protein 28
Glyma.12G213100 hypothetical protein AT3G20560:PDIL5-3:PDI-like 5-3__AT4G27080:PDIL5-4:PDI-like 5-4 28
Glyma.13G166300 hypothetical protein NA 28
Glyma.13G238400 hypothetical protein AT3G46930:AT3G46930:Protein kinase superfamily protein__AT5G58950:AT5G58950:Protein kinase superfamily protein 28